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View Structure Prediction Details

Protein: crn-6
Organism: Caenorhabditis elegans
Length: 373 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for crn-6.

Description E-value Query
Range
Subject
Range
crn-6 - status:Confirmed UniProt:P34508 protein_id:CAD45582.1
448.0 [0..1] [363..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRQIILIVS LIGISNAAYQ CKDNNGSNVD WFVFYKLPHL WNHPDNVPIS NGTGFLYFDV  60
   61 NNKNWKLMPQ GMDVENNAVY YTLQQYYNSN MNTTFSYMYN DEWPDSTIWS NSSGHAKGVT 120
  121 VFDQYTGFWM IHSIPKF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSKDMFRFPS NAHYYGQMGI CISYNTVSLA TIAQQLFYYN TFTYQFNLPQ SFANQFPVLS  60
   61 QLKNKEYNKS PPLTSTKVLK SLGGQHFRHF AKTGEWGKDL YSDFVGPTLK SSIKVETWNH 120
  121 QSGDEYNLPS VCDPNHVQST MSAKYIRLPY AIDYSSYEDH SKFVVAYSES SSKPPIPYVC 180
  181 IGDINRQSHQ IHRGGGTMCI YDQETYFQFA NIISETVPCT KATAEKVDAL ANNRYF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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