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View Structure Prediction Details

Protein: CE25010
Organism: Caenorhabditis elegans
Length: 472 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25010.

Description E-value Query
Range
Subject
Range
gi|91089229 - gi|91089229|ref|XP_968302.1| PREDICTED: similar to CG5304-PA [Tribolium castaneum]
273.0 [0..45] [471..574]

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Predicted Domain #1
Region A:
Residues: [1-472]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFLYEMVSP RAPKIRRVEA FSEMGQSSEV HPEFGFPQIR KTSSFVFWNR TRLYIMVLTL  60
   61 ACLTFIQMNT LTFNFTVIYT HWFERNTEKS LLFSGAAIGG LIGLIPAVPL ISSLGLGNVQ 120
  121 TISGIISAFG AFLFPLAVSI GFYTSLLCRI LQGVGSAIMF TTVGVVPGVW APSNEANTFM 180
  181 AILSCALQLS NIICMPVSGL LCESALGWRS IYYLFGGLTF IIYIVFWFTY SDDPKLHRNV 240
  241 SQKELGKIST GKIEKIKEPV PYLAICTDPT VLITWTSCFG GNMAFFALSL YGPTYLREIL 300
  301 KFDVRETGFL SALPFILSAI VKFGAGQLSD RMTFLSEKAR FVFFAATSQI GFAVGLVVMA 360
  361 FTSDRLIAQI AFNFAIVSSG LNIMGVIKCI QLRCRQHVHF AIAVISFTAY VVQFLAPIIV 420
  421 SIICPDNTPE QWTILFLFIT GVIIVCNAGF PFITRSDPAA YTKQINVENV EK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.221849
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle