| Protein: | srh-241 |
| Organism: | Caenorhabditis elegans |
| Length: | 335 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srh-241.
| Description | E-value | Query Range |
Subject Range |
|
|
192.0 | [0..14] | [331..29] |
|
Region A: Residues: [1-335] |
1 11 21 31 41 51
| | | | | |
1 MQNCISGAGI PDTRYLSSPN FISFTLHCLT FLEIPVLSYG AYCILYKTPS RMKSVKLLML 60
61 NLHFWSCLSD LVISFVGLPY ILLPAPAGYG LGLLDSPQIL VYLMVTFIAA LTASVLAIYE 120
121 NRFYTLFAQN SWWKKVRKPF LFSIYTLVPL IFLPPYFDLP EQESARQLVL SKIPCQPPFD 180
181 FKHREIYVLA LDYDVPVYCI AFGTLVLGVS ITVFGWLIFH MLWFGTLSSS NSIRTLNMQR 240
241 RFAISLTIQS TFMISVVLTP VLTILWIIFK WYHNQMLNNF IFITLSLHGV GSTIVMICVH 300
301 RPYREFTFSK LCYFSKKWRA SVIEKRSGGT LNVVL
|
| Detection Method: |  |
| Confidence: | 48.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
