| Protein: | lin-28 |
| Organism: | Caenorhabditis elegans |
| Length: | 196 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lin-28.
| Description | E-value | Query Range |
Subject Range |
|
|
186.0 | [0..15] | [196..299] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MIEAALENPV PIKSQLSPTP RYFGSCKWFN VSKGYGFVID DITGEDLFVH QSNLNMQGFR 60
61 SLDEGERVSY YIQERSNGKG REAYAVSGEV E
|
| Detection Method: |  |
| Confidence: | 20.221849 |
| Match: | 1mjcA |
| Description: | CRYSTAL STRUCTURE OF CSPA, THE MAJOR COLD SHOCK PROTEIN OF ESCHERICHIA COLI |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [92-196] |
1 11 21 31 41 51
| | | | | |
1 GQGLKGSRIH PLGRKKAVSL RCFRCGKFAT HKAKSCPNVK TDAKVCYTCG SEEHVSSICP 60
61 ERRRKHRPEQ VAAEEAEAAR MAAEKSSPTT SDDDIREKNS NSSDE
|
| Detection Method: | |
| Confidence: | 8.154902 |
| Match: | 1aafA |
| Description: | NUCLEOCAPSID ZINC FINGERS DETECTED IN RETROVIRUSES: EXAFS STUDIES ON INTACT VIRUSES AND THE SOLUTION-STATE STRUCTURE OF THE NUCLEOCAPSID PROTEIN FROM HIV-1 |
Matching Structure (courtesy of the PDB): |
|
