| Protein: | srd-65 |
| Organism: | Caenorhabditis elegans |
| Length: | 325 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srd-65.
| Description | E-value | Query Range |
Subject Range |
|
|
176.0 | [0..5] | [320..166] |
|
Region A: Residues: [1-325] |
1 11 21 31 41 51
| | | | | |
1 MDILQYLFRF YWPPFYLLSL CLFSTMYILI YNFTTNVLKA MRYFLYASCT ATFVSLTLAF 60
61 GTQTRNIDNE NSMGLLCDGF CKFLGPTFCA TCYKAYATSV LTVNLINLHT LYYRTVCLKL 120
121 INAQEIGRNT LIFSWHYLFI IAYLTSTLIP PSDHLAVYNE TLAHYPEYDY TPYLNFGGFS 180
181 QAQKVYLDNS TVAMFLVTLY FPMIGSYWKH QAMKLLKPHV SPNTSDATRV MFRKMIIGLN 240
241 FQIFLPMLSY IPVVFLFILI QVTGHQFLIS QYTITCLGAL PCFLDPIFQI YFITPYRNAV 300
301 RAFFVRKPSA DGSWATRVSA VNSVA
|
| Detection Method: |  |
| Confidence: | 39.154902 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
