| Protein: | unc-11 |
| Organism: | Caenorhabditis elegans |
| Length: | 657 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-11.
| Description | E-value | Query Range |
Subject Range |
|
|
455.0 | [0..1] | [657..1] |
|
Region A: Residues: [1-328] |
1 11 21 31 41 51
| | | | | |
1 MQTIEKALHQ PMPFTTGGQT ISDRLTAAKH SLAGSQLGKT ICKATTEEVM APKKKHLDYL 60
61 LHCTNEPNVS IPSMANLLIE RTQNPNWTVV YKALITIHNI MCYGNERFSQ YLASCNTTFN 120
121 LTAFVDKVGG AGGYDMSTHV RRYAKYIGEK INTYRMCAFD FCKVKRGRED GLLRTMHTDK 180
181 LLKTIPILQN QIDALLEFSV TTSELNNGVI NCSFILLFRD LIRLFACYND GIINVLEKYF 240
241 DMNKKQCRDA LDTYKSFLTR LDKVAEFLRV AESVGIDRGE IPDLTRAPAS LLEALEAHLI 300
301 HLEGGKAPPP TQQHVAPHQF TTGFAFSQ
|
| Detection Method: |  |
| Confidence: | 118.0 |
| Match: | 1hf8A |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| clathrin binding | 3.05300014576459 | bayes_pls_golite062009 |
| binding | 2.13445840178249 | bayes_pls_golite062009 |
| protein binding | 1.7891964555817 | bayes_pls_golite062009 |
| phospholipid binding | 1.38798066582556 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.26458267960741 | bayes_pls_golite062009 |
| lipid binding | 0.4499495998145 | bayes_pls_golite062009 |
| protein domain specific binding | 0.14699617064037 | bayes_pls_golite062009 |
|
Region A: Residues: [329-388] |
1 11 21 31 41 51
| | | | | |
1 QPQPALGDAE RQRYIELEQE RLRQFEDQKK SINSANPFAN DVASAAPAPA TSAAQPDLLD 60
61
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [389-588] |
1 11 21 31 41 51
| | | | | |
1 MFQSSAAPAP QTADVTNPFG NFAAPSAFPT NVPPPAAHSA PFGVQPAPQH SAAPFYANLH 60
61 QAPPMQSQAP NEPENPFITA PAAPQMHNAP PVPPPPASQG APAPINPFAD PSATAASSAQ 120
121 PFGDPDDFKF EQKNVKIKIL IPGHQAAPFG YPNAHPDDLA RMTAQMSLNQ QGAPAGWNTT 180
181 TSAVSNNPFG ATSAPQPMYT
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [589-657] |
1 11 21 31 41 51
| | | | | |
1 APMGMYQQPF GAQPMWNPAM AAYGQQYGYG QPVPPQQQHQ IQLVHAAMAA KNAAQAQQAQ 60
61 AASADPFGL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
