| Protein: | let-756 |
| Organism: | Caenorhabditis elegans |
| Length: | 425 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for let-756.
| Description | E-value | Query Range |
Subject Range |
|
|
255.0 | [0..1] | [274..1] |
|
Region A: Residues: [1-196] |
1 11 21 31 41 51
| | | | | |
1 MAVPAASSIV SYGGAATSNF LTTPVTPFLA GFYNSNFVTD RINSCAPYRV DRIRKQLQDE 60
61 EENGYPPADD RRRGALFCRS GTWLEMLPIE NPDDGSTRVK VHGTKEESSK FSIVEFVSVA 120
121 MSLVSIRGVE TKNFICMDPS GKLYATPSSN YSTECVFLEE MMENYYNLYA SCAYGDRFNP 180
181 WYIELRRSGK PRRGPN
|
| Detection Method: |  |
| Confidence: | 46.522879 |
| Match: | 1ihkA |
| Description: | Fibroblast growth factor 9, FGF9 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| fibroblast growth factor receptor binding | 5.68976822724664 | bayes_pls_golite062009 |
| growth factor activity | 5.6790632853895 | bayes_pls_golite062009 |
| receptor binding | 4.8109037277027 | bayes_pls_golite062009 |
| cytokine activity | 3.72907359340826 | bayes_pls_golite062009 |
| protein binding | 2.99442649109752 | bayes_pls_golite062009 |
| binding | 2.90110516688922 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.49177421879896 | bayes_pls_golite062009 |
| heparin binding | 2.1616134585534 | bayes_pls_golite062009 |
| polysaccharide binding | 1.81686028727894 | bayes_pls_golite062009 |
| interleukin-1 receptor binding | 0.8084616632765 | bayes_pls_golite062009 |
| pattern binding | 0.323275442862789 | bayes_pls_golite062009 |
| nerve growth factor receptor binding | 0.308245352535379 | bayes_pls_golite062009 |
|
Region A: Residues: [197-425] |
1 11 21 31 41 51
| | | | | |
1 SKKRRKASHF LVVHHDLDRL RSPVPNGNDV TDLVVASLFH QPPSHPLFRQ QTVTKPPNPH 60
61 RISNLRAKVE MTNQAEKQRL LEEKKRRREK KKRRREDRLR KEEQIREARR QELKSLREEE 120
121 LRRRYQQQQQ QQASTQTRYN RPQNPANPYP TYRPLPTRST VQSPRPAYNP YWQSPVTQAP 180
181 HHNSHHHHHH HPRVSSSSDP QQRHQSQQHY LAQTVSNPNR QNVNYQRYP
|
| Detection Method: | |
| Confidence: | 6.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
