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View Structure Prediction Details

Protein: acdh-6
Organism: Caenorhabditis elegans
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acdh-6.

Description E-value Query
Range
Subject
Range
gi|77996195, gi|... - gi|78044080|ref|YP_360183.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901], g...
476.0 [0..21] [403..1]

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Predicted Domain #1
Region A:
Residues: [1-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFLARKTSS LLPATTSSTV KHMIYDEPHF AMQNSLAKLI KEKINPNVAQ WEKSGRYPAH  60
   61 FVFKMLGQLG VFAVNKPVDY GGTGRDFAMS IAIAEQIGAV DCGSIPMSVM VQSDMSTPAL 120
  121 AQFGSDSLRN RFLRPSINGD LVSSIAVSEP HAGSDVSAIR THARRYGSDL IINGSKMWIT 180
  181 NGDQADWACV LVNTSNAKNL HKNKSLVCIP LDSIGVHRST PLDKLGMRSS DTVQLFFEDV 240
  241 RVPSSYIIGE EGRGFAYQMN QFNDERLVTV AVGLLPLQKC INETIEYARE RLIFGKTLLD 300
  301 QQYVQFRLAE LEAELEATRS LLYRTVLARC QGEDVSMLTA MAKLKIGRLA RKVTDQCLQI 360
  361 WGGAGYLNDN GISRAFRDFR IFSIGAGCDE VMMQIIHKTQ SKRQQKRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 121.0
Match: 1jqiA
Description: Butyryl-CoA dehydrogenase, C-domain; Butyryl-CoA dehydrogenase, NM domains
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle