| Protein: | wrt-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 557 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wrt-4.
| Description | E-value | Query Range |
Subject Range |
|
|
601.0 | [0..1] | [557..1] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MRFSLLALVL LSSSYKFTYG SECGDSTIPY SLEVLSSGQP ILGCARPTCF GWHSNGHQLP 60
61 TNAKFFRIDQ QSDGFLRDDP LAIHTFDAAD PRVYAQQQAS CEQEFQSLSC NPEDQWVGGI 120
121 APVMNASTTK IVAYKCCTYA PLRASIDRGV ATVSGGQIVV GGEIFADNKP YAFDYISNVE 180
181 KKIDSEGEIF YEVNIKRFSC LDL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [204-334] |
1 11 21 31 41 51
| | | | | |
1 QKVDRSVPEI LNSENTIRHV NGHRFVVHQA PTVDVETPVE TGQLVVPQGV QNGQEVIIEE 60
61 IVAQEGFVQE TNPQPPPPPG QQGGFVQPQG FQPQGGFQPQ GFQPQGFQPQ AFQPQVVQNP 120
121 VPAAPAGYAP M
|
| Detection Method: | |
| Confidence: | 8.154902 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [335-557] |
1 11 21 31 41 51
| | | | | |
1 GFAPSGLQLY YCFPGDAMVN VYNGGFKRMD ELAVGDWVQA LDKNGSQVTF IPVQYWLHRD 60
61 PKQVADFVEF TLDNGETFSL TEKHLVFVTQ CSVPYSEDEN INANPVPAER VNIGDCFYIA 120
121 HRKKSQMYQR VKVLDINIVQ KTGIYSPMTS RGHLLVDRIH ASCHSETDNY SLQNTFFTNV 180
181 LRWKSQIRNY FWTVEDSTNE DNIGYGLNGV MAVLDIVIPS KLM
|
| Detection Method: | |
| Confidence: | 42.69897 |
| Match: | 1at0A |
| Description: | 17-KDA FRAGMENT OF HEDGEHOG C-TERMINAL AUTOPROCESSING DOMAIN |
Matching Structure (courtesy of the PDB): |
|
