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View Structure Prediction Details

Protein: CE24657
Organism: Caenorhabditis elegans
Length: 266 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24657.

Description E-value Query
Range
Subject
Range
CE24656 - status:Partially_confirmed UniProt:Q9NA50 protein_id:CAB60550.1
188.0 [0..12] [262..7]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRPSSAVIL YFIFFMCGFA ESSDEDLQMV VIWGAPSGVD VWEPCSETWK QCLQKCLDEE  60
   61 DCVLIAKITT NFYIFRQGKE FHVVQKTKES GEKVAFKKTN NMCKVSMPKP LFGNDTVTEI 120
  121 YQSETVAYKY EITEWDINGM AQWTFDFQYF 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.522879
Match: PF08277.3
Description: No description for PF08277.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VQCDDESFVS IRGANVVCIT VRAFPDPYCK NRTAGEQLCK EGNGSGITGP YSYDEGYKMT  60
   61 EYIDKKLQAE PISQKFDYFD FWTDGICSQP DGHNITDGTL DETTGYKWSQ TNNFKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 1bj3A
Description: Snake coagglutinin alpha chain
Matching Structure (courtesy of the PDB):

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