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View Structure Prediction Details

Protein: acs-13
Organism: Caenorhabditis elegans
Length: 719 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acs-13.

Description E-value Query
Range
Subject
Range
gi|168278731 - gi|168278731|dbj|BAG11245.1| acyl-CoA synthetase long-chain family member 6 [synthetic construct]
gi|57165412 - gi|57165412|ref|NP_001009185.1| acyl-CoA synthetase long-chain family member 6 isoform b [Homo sapie...
600.0 [0..5] [716..27]

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Predicted Domain #1
Region A:
Residues: [1-719]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVITDTAAWV QSQSRSIVDF ISAPNSNSSL PPYVQIGAAA AVTMGLGYYL SKSSSSTSGS  60
   61 YSFSGVTYSG NVKPLVDPMN QSRILPDGSR ISAYLKDDEL QAFLFEDART LYQGVRRGAR 120
  121 LSNNGPMLGR RVKQSDGSIP YVWESYNTIL ERADNVSVAF RELGVPTGNA ENIGIYSKNR 180
  181 AEWIITEFAT YNYSNVIVPI YETLGSEASI FILNQAEIKI VVCDDISKAT GLLKFKEQCP 240
  241 SLSTLVVMEP VTDELKTTAS SLGVEVLTFE DLEKIGKNAK TRPAHIPPTP EDLATICYTS 300
  301 GTTGTPKGVM LTHANVIADG VCMDFFKHSG IAATDSMISF LPLAHMLERV IESVCFCVGA 360
  361 KVGFYRGDIR VLAEDIKELK PTVVPVVPRV LNRLYDKVMS EVNKSTLKKM LFDFAISYKA 420
  421 RDMANFNIRN DGFFDNLVFK KIREGFGGRV RLMITGSAPL STNVLTFVRA AMGCVVVEGY 480
  481 GQTECVAACT VSMEGDSLAG HVGMVIPSCQ IKLVDVPELN YYAKDQAGEV CVKGHIIFKG 540
  541 YYKNEQQTKE TIDEDGWLHT GDIGRWTPEG TLKIVDRKKH IFKLSQGEYV APEKIENIYV 600
  601 RSKYVAQSFV HGESLKTCLI AIVVPDAEVL VPAMADQGIK GTFEELCNND AVKKAILDDM 660
  661 VAVGKKAGLF SFEQVRDISL SAEQFSVEND LLTPTLKSKR PKLKAHYSKQ LDAMYSKLP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 133.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle