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View Structure Prediction Details

Protein: CE24533
Organism: Caenorhabditis elegans
Length: 211 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24533.

Description E-value Query
Range
Subject
Range
gi|109066641, gi... - gi|109066643|ref|XP_001091631.1| PREDICTED: similar to transmembrane emp24 protein transport domain ...
239.0 [0..2] [211..15]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLIALLSL ATYADSLYFH IAETEKKCFI EEIPDETMVT GNYKVQLYDP NTKGYGDYPN  60
   61 IGMHVEVKDP EDKVILSKLY TAEGRFTFTS NTPGEHVICI YSNSTAWFNG AQLRVHLDIQ 120
  121 AGDHAQDYAQ IAQKDK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 16.267606
Match: PF01105.15
Description: No description for PF01105.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [137-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LNELQLRIRQ LLDQVDQITK EQNYQRYREE RFRQTSESTN SRVFYWSIAQ VVVLAITGAW  60
   61 QMRHLRGFFE AKKLV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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