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View Structure Prediction Details

Protein: CE24445
Organism: Caenorhabditis elegans
Length: 427 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24445.

Description E-value Query
Range
Subject
Range
gi|157745565 - gi|157745565|ref|XP_001667879.1| Hypothetical protein CBG14981 [Caenorhabditis briggsae AF16]
gi|187027607, gi... - gi|39598301|emb|CAE68994.1| Hypothetical protein CBG14981 [Caenorhabditis briggsae], gi|187027607|em...
432.0 [0..1] [427..1]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLEYLIAN PHILSDTTLT DALAALASST NVENQDEEFD MEVNSDDEMK IDLSALINPS  60
   61 VFNALQLPIG TGRFPNPSPP RSSSGTNTPI RKTPGSRPDR GKFTILDNAE VAGPEEVLNV 120
  121 NFDSEILQRI F

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDPKLGIQFL ARYGLIPNTR VCRVQDCPKD QLMSLIKHAN GFVWRCRSCR KRREKRIITK  60
   61 ISVYEGTFLF YSRMPLNKFF IFMLNWCENP GLSITEYNRL MGENRLVEET IYNTIGFMRD 120
  121 IIQNWCDTII SSHV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [266-427]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIGGPHRVVE VVETLSTEQL SNKTRNRRTR HYTTRTVFIS LADDKIKSVD FPLHNVNDLE  60
   61 RALLECVQPG SIIVMRDSFM ERFGQQEEIS NALFNHYKVK SICDVWPDFN ERERNKQYIK 120
  121 TEMNQVPNVN QEPYAYEYFF RRCFADKCFN HLLRVIRLLY QK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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