| Protein: | CE24371 |
| Organism: | Caenorhabditis elegans |
| Length: | 627 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24371.
| Description | E-value | Query Range |
Subject Range |
|
|
623.0 | [0..41] | [456..1] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MSNHRSNFRD YQREGIRANN AGTSGDAVRQ NGNPISVAKH VDGKKSVYML FLRQIGQKKF 60
61 LTEQGHRYNQ NDQADKDIMT RYYHGMCPDL KQKFEREVAE HNGNRGLVIK TKHQRAQRNR 120
121 EMRHRNPDEF QQLRRAHLET LSQTPS
|
| Detection Method: |  |
| Confidence: | 20.69897 |
| Match: | 1qbzA |
| Description: | Retrovius gp41 protease-resistant core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [147-198] |
1 11 21 31 41 51
| | | | | |
1 VIALPRDINH VLHITEDLDA FCLANRKKAK RIMTSYIAQR SDDPGNPLLC ED
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [199-284] |
1 11 21 31 41 51
| | | | | |
1 YTMQIVSVFP VAYAFKPSIN KLSSYPAEIS VTTFNLKNGI IQNESRFVKF DAAWFYPDAD 60
61 DIGHEELSRK AMADELGISP NGPADG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [285-493] |
1 11 21 31 41 51
| | | | | |
1 CEPYEVFEWL QHLLKQHPKS PILCDRAQFN FVYYGIKTLA TYTGINAITF FQEVIIPSIL 60
61 SIQDFTSVIL EKAPTDVPRV WRDVDICNQF QYHFLIPRTE LNLFCSFHEN KPSPTKYNCV 120
121 KAHNARLLDN FFTVIKGNRL QGFVISPPVH EICIQDGSDT SLPQTILART ISRNDAEVYA 180
181 ARQRDTDEQY DVHQEGPSNH DQYEFASEP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [494-627] |
1 11 21 31 41 51
| | | | | |
1 LDFEEDSDEE NYNEQLDVPY SYNDHFISSS SVREPEHPSA RSRDVAPNVQ QESVVVPAPR 60
61 RLSPQRAPRP SQNSPNAYSE RKSFSAFPSE DPSEDYETPI ISHIMNRNEA DQYFNILDSV 120
121 KPGQKYKIIK FDDF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
