| Protein: | CE24338 |
| Organism: | Caenorhabditis elegans |
| Length: | 691 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24338.
| Description | E-value | Query Range |
Subject Range |
|
|
594.0 | [0..2] | [691..114] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MDPLDDLLTQ LEGVEEEELK PVNRAPRLLN MEEACENQGS SEKPSDSSSK NRYEDDDSDD 60
61 EELYVKKREL TEQGALLKRH LEKNSSTSGP KATDAWKTNK KSVLTGLTKP ST
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [113-301] |
1 11 21 31 41 51
| | | | | |
1 DTVTVGIVRF DKFQISIRNP KISATSFGAF TAGMKLEKLS NLKPTSNFKE AWCTIGVIVE 60
61 KGFKKKSANG NDFLIWKLHD LKDCQTQPVK LLMFGDAIKD HWEIKLGSVI ALISAQIADD 120
121 STASGAKKTV SATLKVAKSN NIVEIGQSAH FGTCKGIRQQ DGQRCSNFVN SSLSEFCVFH 180
181 VMSAARKLS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [302-390] |
1 11 21 31 41 51
| | | | | |
1 AKRGVFNAVT CGPNVGGLSF NKKPGTPRPP ISSRPGISGS GLATSSGSPM LRDTMRPADS 60
61 FTLTTPTSGL KKITKEEEKS SLNDLLSQR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [391-597] |
1 11 21 31 41 51
| | | | | |
1 KNTFAARQML KLKEKKDEKL AESVEEMIEF LGTTGGEEKP SVHSSFGEFL AADTRREKAA 60
61 TVDLRASSAT SGTSASSPGG SKLWTMSLAN KKAAPLGHKD AQEHAARLRA IAILKAKRKE 120
121 AEMEKLTGGG GGVKRKASGT PTAPEPEAKK PRSQKMDEIR AMLARKSTHH KEAEKAEHDM 180
181 LQRHLTGMEE REKVETFTTT CVEVKNV
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [598-691] |
1 11 21 31 41 51
| | | | | |
1 KVVTCNQCKY TSQFASSECI KKEHKLIKHT ADKRFFKCTG CKKRTVCFEM MPVKHCAHCN 60
61 ENKWERVAMK DERKVVLDTE NLLLRGEERP FVGS
|
| Detection Method: | |
| Confidence: | 1.05 |
| Match: | 1i3qI |
| Description: | RBP9 subunit of RNA polymerase II |
Matching Structure (courtesy of the PDB): |
|
