| Protein: | obr-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 449 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for obr-1.
| Description | E-value | Query Range |
Subject Range |
|
|
514.0 | [0..9] | [449..472] |
|
Region A: Residues: [1-449] |
1 11 21 31 41 51
| | | | | |
1 MPCSNSNGPP ATAGVHLTPT KRHIGAGDPS SSTCSDSGAV VVVGAHKGGR QRRTTVPERP 60
61 NLPINLWSIM KNCIGKELSK IPMPVNFSEP ISVLQRVTED LEYANLLETG AKLSTLEQMC 120
121 YVAAYAASNY STTCHRTNKP FNPLLGETFE FDRMDDLGWR SVTEQVSHHP PAAAHHAEGN 180
181 GWTMYQDFTM TSRFRGKYLS VIPIGFTHVV FPATKSHFSY RKITTTVHNI IVGKLWIDNH 240
241 GDMEITNHET NEKCLLKFVP YSYFSREQPR KVYGIVRDAE GIPKYVVQGT WDKSIDMLKV 300
301 SSWNGNHEKP KLEVDETSLK RIWTANPLPK NAEKMHNFTK LAIELNEPEE GVAPTDSRLR 360
361 PDQRLMENGE WDEANRKKLE IEEKQRVVRR RREAEKELAM KKGDKYEEYE PTWFVRVQDE 420
421 SNGALIHQFK GGYWEAKEQQ NWEKCPDIF
|
| Detection Method: |  |
| Confidence: | 66.221849 |
| Match: | 1zhtA |
| Description: | Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| sterol binding | 3.12877992228795 | bayes_pls_golite062009 |
| steroid binding | 2.54679035876403 | bayes_pls_golite062009 |
| binding | 1.67154210149282 | bayes_pls_golite062009 |
| lipid binding | 1.46539100663772 | bayes_pls_golite062009 |
| oxysterol binding | 1.1738554488982 | bayes_pls_golite062009 |
| phospholipid binding | 0.0867097353003303 | bayes_pls_golite062009 |
