| Protein: | rps-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 259 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rps-4.
| Description | E-value | Query Range |
Subject Range |
|
|
477.0 | [0..2] | [259..3] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MRGPKKHLKR LAAPSHWMLD KLGGVFAVRP NPGPHKLRES LPLSLFLRNR LKYALNYTEA 60
61 KKILTQ
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.649 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.516 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.488 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.498 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.413 | N/A | N/A | c.47.1 | Thioredoxin-like |
|
Region A: Residues: [67-185] |
1 11 21 31 41 51
| | | | | |
1 RVVRVDGKVR TCHKFPTGFM DVVAIERTNE YFRMLYDTKG RYVVHRIQAA EADFKLCKVK 60
61 SVRTVNKGVP VLTTTDGRTI RYPDPHVKVN DTIVFNISTQ KITDSVKFEP GNLAYVTGG
|
| Detection Method: | |
| Confidence: | 30.958607 |
| Match: | PF00900.11 |
| Description: | No description for PF00900.11 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [186-259] |
1 11 21 31 41 51
| | | | | |
1 RNVGRVGIIG HRERLPGASD IIHIKDSAGH SFATRISNVF VIGKGNKALV SLPTGAGIRL 60
61 SIAEERDKRM AQKH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
