| Protein: | mig-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 529 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mig-1.
| Description | E-value | Query Range |
Subject Range |
|
|
324.0 | [0..21] | [503..485] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MGPFRGYLGV TWLLLLFVIG VDGQRCQKVD HEMCNDLPYN LTSFPNLVDE ESWKDASESI 60
61 LTYKPLLSVV CSEQLKFFLC SVYFPMCNEK LANPIGPCRP LCLSVQEKCL PVLESFGFKW 120
121 PDVIRCDKFP LENNREKMCM KGPNEQGAIQ DER
|
| Detection Method: |  |
| Confidence: | 39.30103 |
| Match: | 1ijyA |
| Description: | Frizzled 8 (FZ8) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.842553069457781 | bayes_pls_golite062009 |
| protein binding | 0.38272509672861 | bayes_pls_golite062009 |
| signal transducer activity | 0.10914920024051 | bayes_pls_golite062009 |
| molecular transducer activity | 0.10914920024051 | bayes_pls_golite062009 |
|
Region A: Residues: [154-529] |
1 11 21 31 41 51
| | | | | |
1 AKFAAKESED DGNDRVEDIQ REVDRLNGKC PQDEVFLNRS SKCVPLCSNP QKVGQTDRES 60
61 ATRLLLFLSL SSVILTILSV FIVGLSIYFR RLEMLHSLTE TAMFFSCISF CATSVIYIVS 120
121 ISFKDQFQIS CTDYTHHLLF VVGGLSHVPC SSVASLIYYT ATCSRLWWLL ICVSWNKATR 180
181 TSHILDDSRT RVIMLILGIP LAPLMLALLA KAVAANPLTG LCFIGAASPG TDWIFNFCRE 240
241 LILFLISSIA LSSACCRLLG SDEQDVNGFA GVIAAVYPIA GLFYMLSFVN DATQPFLSLD 300
301 RSFNAVSATK FSFDLLLSFI MCAFCLIYLL FKLTRSSSKV SKEGYQPAVP KLPQPAIPGS 360
361 VRSNTYASTF RTNNMI
|
| Detection Method: | |
| Confidence: | 8.30103 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
