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View Structure Prediction Details

Protein: CE23990
Organism: Caenorhabditis elegans
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE23990.

Description E-value Query
Range
Subject
Range
gi|50751041 - gi|50751041|ref|XP_422231.1| PREDICTED: hypothetical protein [Gallus gallus]
303.0 [0..4] [276..11]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPTGWQKI LYRKQPFPDN YSGGDAQFLK ELRKNVSVVH YDYKSAVFGC MNFLTHLDMI  60
   61 TMYFVLFLNI LHSNWSINIL YSVFSLTIVL YLFFCKFLIP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPANAKEHAR TIFTLFIFAY AFTPVIRTLT TSISTDTIYS TSIITAIFSC FFHDYGVKAP  60
   61 VVSYPTSVST GLSSAIFLLS RLEGDTPTLL LLVVAFTLHA YGAEFRNRIF HVYPCLSSTI 120
  121 FCFLSLFSIY CISDFSLELS ICFALLHIFI LFICPLILIL KQTGKCTIHG PWDEAVPLKS 180
  181 NT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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