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View Structure Prediction Details

Protein: mut-15
Organism: Caenorhabditis elegans
Length: 541 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mut-15.

Description E-value Query
Range
Subject
Range
gi|39583362, gi|... - gi|39583362|emb|CAE66336.1| Hypothetical protein CBG11587 [Caenorhabditis briggsae], gi|187030192|em...
gi|157764930 - gi|157764930|ref|XP_001674808.1| Hypothetical protein CBG11587 [Caenorhabditis briggsae AF16]
716.0 [0..26] [455..9]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNSNGIGIC SMGVVNAFDL DGLGNARRSC FSVKEARAHN PEWGPAASRE EVAYVRSSET  60
   61 GSLQITRKLM KFSISGRRGY SPWRTLQDAL YCSLGRFHNG EHLFCIHSGP NHEFYYGQPI 120
  121 LHSIDRFRSH RKPFPRCIII TTDGKRSKSV MRGLLNKRRS SNSTRPNTHI TNLD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [175-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTELSNEFMT SNRSRVFIGS FKKIKEYIDK LKNEMEQLDD FISVLRFVII NNAEKLKGNS  60
   61 EFADSLGRLA QTFESSLTRF IFAYHFSSSV ASLTETLEFC KGKMERPVLI EADNPRVRDV 120
  121 FSNIECKLVR PISEIASLLP TQESTLENNN ISPAIVSQYL TESTQKLKIL TMLIKKERDA 180
  181 RAADNGRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [363-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRRDKPRRER ILVITRTTET CIRVMMYLRL KMQTLAVNLR YNIHKITTCD SEEDVEKRNF  60
   61 EFRTGNLDVL VIDWRSIRAV HRGAVDTIVM FDS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [456-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PHPLYFQTIM ETELQNLASI IGVKLKLYMI IDQNKDFRLV REYLKFLECN KTRAPTWFRD  60
   61 LYQKYLADRQ SRTTAAVATA TSAVPV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle