| Protein: | acr-10 |
| Organism: | Caenorhabditis elegans |
| Length: | 510 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acr-10.
| Description | E-value | Query Range |
Subject Range |
|
|
396.0 | [0..2] | [505..137] |
|
Region A: Residues: [1-294] |
1 11 21 31 41 51
| | | | | |
1 MQKFQDGQNQ IIEVNAWLKY VWMDYRLQWD PLQYDNITSI RFAGGENQIW RPDILLYNSA 60
61 SEDFDSSFKS NEVVYNTGEV NWIPPGIFRA SCKMDITYFP FDDQVCYLKF GSWTYHGLAL 120
121 DLSIIAEEDD SELSIDLSTY TPSGEWHLTK APAVKDVKYN SCCKEPYSTV TFYMFLRRRT 180
181 LFYLFNIILP SLLISIMTLM GFCLPAHDMS EKIGYQTTIL LSICFFVTIV SEMTPPTSES 240
241 VPLLGMFFSS LTLISSVSTA FTITVLNFRY RQVQNIHMHP IFYKVFLIWI PWLL
|
| Detection Method: |  |
| Confidence: | 67.221849 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [295-413] |
1 11 21 31 41 51
| | | | | |
1 LMKRPGVFYK KRRATVQARE EISFFDNGDD DCCPKPPEFD YSLSIDSADT LPLPPRPKPL 60
61 LKKMHRLVQH IHQSNFVLFK RSRRTSSSRQ KSRRRNSKSQ RRPLVLTKNV NKSHSLRSR
|
| Detection Method: | |
| Confidence: | 32.30103 |
| Match: | 1oedA |
| Description: | Acetylcholine receptor protein, alpha chain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [414-510] |
1 11 21 31 41 51
| | | | | |
1 RFTQFEKYIK KCIDDAKLRK NSTYSTYSMM IITYYRQIDE MLKLLNRRLD KQRKYLFKQE 60
61 DWKFAAMALD RLCLLLITLL IVMCLFGMIL STPHFEP
|
| Detection Method: | |
| Confidence: | 3.56 |
| Match: | 1oedE |
| Description: | Acetylcholine receptor protein, gamma chain |
| Matching Structure (courtesy of the PDB): |
|
