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View Structure Prediction Details

Protein: CE23709
Organism: Caenorhabditis elegans
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE23709.

Description E-value Query
Range
Subject
Range
CE39033 - status:Partially_confirmed UniProt:O61952 protein_id:AAC17803.2
461.0 [0..1] [325..1]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKLTHRFGL TLFVLLSLYF VSRRFNVDNA EEISTKAFIK PFISYAPSFF TAPDNKLIAC  60
   61 EISKSMSQLT LNLMCLLYNE TQYLADNNSF SDTWATSNRS CTKEFNFLNP SEVLKIDKNT 120
  121 VRFAFVRDPF RRFVSLYLNK CVNKNECYDC GSDMRCVVEK IYNSFYDIQN SRNETLKIGH 180
  181 IEAHAAPVTW NCNFHQG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [198-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEKWELLAMG SDTEERVSSA ARLADILRKQ GVRGSLVEKI HKNILSMFLK DLQNCGVRFF  60
   61 VAAETAHSTH KSSNRYEAER QVREDPFVRG YLHKIYLFDY LVFPFDRRVL DTAYQKIDSK 120
  121 LFLEEVAK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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