YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE23704
Organism: Caenorhabditis elegans
Length: 137 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE23704.

Description E-value Query
Range
Subject
Range
gi|114685320 - gi|114685320|ref|XP_001159736.1| PREDICTED: hypothetical protein [Pan troglodytes]
221.0 [0..19] [132..252]

Back

Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFRMKVLEN SSKHNTPKKQ KTFQHYLPAG DRCYSCIHCR ANLAAHAELI SKSFQGSQGK  60
   61 AYLFNAVVNV GCGPAEERVL LTGLHAVADI YCEICKTTLG WKYEHAFESS QKYKEGKFII 120
  121 ELAHMVKDNG WDEQNDS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.957
Match: 1zu1A
Description: Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.71755880039503 bayes_pls_golite062009
nucleic acid binding 0.0828253815733649 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle