YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE23623
Organism: Caenorhabditis elegans
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE23623.

Description E-value Query
Range
Subject
Range
CE17467 - status:Partially_confirmed UniProt:O62074 protein_id:CAB03918.1
587.0 [0..2] [366..187]

Back

Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMKFRGLSK IKNRTVLHNH VAKLFDIFIR GVIQKAEGDL EHTKFWLNLT HSGYEEGEGH  60
   61 HVQHKTYQTV DGGVLMNILA RQMQSNKSIK LDKSFVISMN VFKRKDKSVA GRGRNRASLP 120
  121 PKGTRDVNRM RQFILEHTFG VKNERIC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [148-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPSHCLPKAL AVGKLLFDKK RCPDSVERAA LENKWQSVAK SDATDEHKST SELKMAKQLL  60
   61 EAAGMDTEQE VHDRSDLARL ASHIHEYQIK LWTCNGRQPV AYIDAEYNPE GTKFIGLFFY 120
  121 DGHYEVVDHI RGKKGAHFCD KCYQFVEKNH AKNCEKKCRS CGHFECGQQE KDVVCDTCNV 180
  181 TFKNQMCYDN HLKKVSQQAL PHCEKCFVCR DCGRLDQTAR FRGHWLHTLK SRNSLVLQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.58
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle