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View Structure Prediction Details

Protein: CE23019
Organism: Caenorhabditis elegans
Length: 648 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE23019.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
239.0 [0..69] [624..1864]

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Predicted Domain #1
Region A:
Residues: [1-414]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKSKSKKED LIPEIGDFTK FFKSRSKFSD QITDVISNVY EWSTSLEPSE DNLPLPFVSK  60
   61 NEEVVWSYLK HQNKQLDGIN KKYKGFLSEL IGKSHIRVAA KIQDSEGSED GSDGSDGGSE 120
  121 EELDDDEEEL EDEELEDEMI DDEDEADLFN LSESDLKTLD ADLKKMEEEE AGEEKEEVEK 180
  181 ATEQPKKFKK SIVDDQFFNL DEMHDFLQKT ERAGGKKAAQ DEEMMFEDED SWDGKTDYTY 240
  241 EDFFGSRETV AETEKMNGEK KKIEKDKKRK AGDKADLSLD DGKNKKRVRF AMDEEPEEEE 300
  301 VEDEEQEDIN DEEEPPEDEP VLLGADLEEP KEESAFAKRQ SKMKERIAKL EEENLAPKSW 360
  361 ELSGEVAADQ RDQNTLLEKH VDFDHGAKRA PEVTEEFTDR LESLIKQRIR DKAW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [415-648]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDVIRVKKVE AKGAKFETEA IENQMNQKTS LAEVYEKEYQ NSTGNSADGA AGATKPNEAH  60
   61 EAIKSKMGDL FRLIDALTHF EYKPDQAREE VKVVSNMAAL RVEEVGITAS TEAQLMAPEE 120
  121 ISKKMKAIEK SKDERDATDK ARERRQKKAK QRSMLEKFGE ERVFGEQKAV KLAKKERKAG 180
  181 KEKGGGVDKI KSSNFFAKLQ ETVAAEKKDG AVTKKKKKIV KRLKSDKNSA AIKL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle