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View Structure Prediction Details

Protein: CE22966
Organism: Caenorhabditis elegans
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22966.

Description E-value Query
Range
Subject
Range
gi|157770059 - gi|157770059|ref|XP_001676850.1| Hypothetical protein CBG14835 [Caenorhabditis briggsae AF16]
gi|187028185, gi... - gi|39598180|emb|CAE68872.1| Hypothetical protein CBG14835 [Caenorhabditis briggsae], gi|187028185|em...
358.0 [0..1] [265..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNAEPPPKR MHTDQLDSSI DTDPSSGDAD GYVHYADYLL LHSHVASLTE VITSLRDALL  60
   61 SSSAKTVVEK VALCPQIPQL PKPIHPALKS GATASYASIT AL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PASTASTAST AMSPTDHSEA TNRLIDKSTK AVVERLFDDK EDKYQDAENL AFFQNVARNH  60
   61 NLPLPIRCHR HECKSDKRPL KLQFSSKIDR DSYLHGFNRA KNSDSSILGK HPMARIRRDL 120
  121 TNEELLKLRE SRKKCYDENL KAGKSLFIVK DINVVANPKP KDFRPKLPVQ 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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