| Protein: | ubc-19 |
| Organism: | Caenorhabditis elegans |
| Length: | 292 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ubc-19.
| Description | E-value | Query Range |
Subject Range |
|
|
201.0 | [0..30] | [292..21] |
|
Region A: Residues: [1-292] |
1 11 21 31 41 51
| | | | | |
1 MEENQEKLEK SLKIPGNILK EQALAAEFVE VCRAPIDGIF VSPSANNKFL WFGVIFVRKG 60
61 IFGGGIFRFN IHIPLEFPDA SDLPRVIFEQ SNLFHPLICT KSKELCLNRS FPEGWKKEKH 120
121 SLRRVLVVLQ RSFYSYDVDT DKCINPEASV LYKEHRDKFR EIAKECVEAS RSMVYDELAE 180
181 QEHDPNGIRL LPWDALTHKA AREKMLQIGD NSRFQGTAAD FRREHIFSKM GLQVSEIVGK 240
241 SYPNSYSWFD PAEMTVITKY DDVDLSQVNP SDSARLDREK HGIEPLDLGN LN
|
| Detection Method: |  |
| Confidence: | 31.0 |
| Match: | 1tteA |
| Description: | The Structure of a Class II ubiquitin-conjugating enzyme, Ubc1. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.36134415541475 | bayes_pls_golite062009 |
| ligase activity | 0.0718869348666398 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.0371971638467299 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.0334819228148397 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.0318206634586797 | bayes_pls_golite062009 |
