| Protein: | faah-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 762 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for faah-5.
| Description | E-value | Query Range |
Subject Range |
|
|
546.0 | [0..210] | [730..2] |
|
Region A: Residues: [1-170] |
1 11 21 31 41 51
| | | | | |
1 MSKMEDKIKL AAYSELLEKA LARDWSPVDF IKNEILFVLD ELKMDVDKYK KNREEFVKIG 60
61 KCVGHAHALL LIAKFGNEKS DGAATIILGN IPEDVSFPKL FPQCVGLGKF FGICMSTVKS 120
121 PCLTAKLTFD DHHSAADFAE NANEFEWDGR KLIAICRKPS RNRKIRNFRV
|
| Detection Method: |  |
| Confidence: | 1.24 |
| Match: | 1zh5A |
| Description: | Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 2.41367603917007 | bayes_pls_golite062009 |
| RNA binding | 1.56896102668936 | bayes_pls_golite062009 |
| binding | 0.935547767962657 | bayes_pls_golite062009 |
| mRNA binding | 0.390656318329997 | bayes_pls_golite062009 |
|
Region A: Residues: [171-762] |
1 11 21 31 41 51
| | | | | |
1 RQADAFTDFE NRTLPSKLLH SERINGSKEN ADEIEKTFQT VLAMDFPTLR EALQSEKFNA 60
61 YTVLSAYVWR AIKINRKINC ITEVIKEAFT DAARLDDEYR EQPKPPLFGI PFSVKSNFYV 120
121 TGYEATVGLA SLLEQRETTT CSLVKFLKNQ GAIPFCLTNL PQGLLSYITS NPVYGTTKNP 180
181 WDFSRTPGGS SGGEAALLAA GGTVFGIGND LVGSLRIPAA FCGLVSLKPT QDRLHESEMH 240
241 PGLPGRGRLG YSCGFFTRNV EDQEYLLRLV IGKPEYQQMS PYSSLSPLLD TSSDDKRKPV 300
301 IGWFVDDGFC SVSPSNQRAV EETIGKLKEL GYEVKEFKVN DIDTKFHSHA VADMLFRNVM 360
361 PDNGEYMSEM YGSEPYDRYM SHFIRLVRYK QVFVIRWLAQ HVLLPLAQYT PLKSKQVLCL 420
421 GKAYNSDPAC VRQNQEKTDS YKMKWIRYWK GLGIDALICP SFITPAQPFK YPVLLTTGAF 480
481 ITGLFNMLDC PSAVVPVAPV REKENDKFET NGDFVLKLQA AAIKETSGMP NSVQIVALPN 540
541 QEEMCLKVMR IVEEISEGVQ VLRWKSENQT IWTNGDSFEC FERFEKKIAP KK
|
| Detection Method: | |
| Confidence: | 93.0 |
| Match: | 1mt5A |
| Description: | Fatty acid amide hydrolase (oleamide hydrolase) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| fatty acid amide hydrolase activity | 1.00789760760064 | bayes_pls_golite062009 |
| hydrolase activity | 0.989553693425583 | bayes_pls_golite062009 |
| catalytic activity | 0.906509857495572 | bayes_pls_golite062009 |
