| Protein: | aat-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 541 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aat-9.
| Description | E-value | Query Range |
Subject Range |
|
|
308.0 | [0..7] | [397..964] |
|
Region A: Residues: [1-398] |
1 11 21 31 41 51
| | | | | |
1 MSSIEDLPTV GDVAATRHQM GLWSCMSYVI ANIIGAGIFI TPGTVLKLAL TNGMALVVWL 60
61 GCGLISLIGG ICYIELGTSI RDPGCDFAYN VYVGWEGIAF SFMWVGVIMS FPASAAVQAQ 120
121 TFGQYIVAGL SPIWHLGSPY DVILERGLGF ALIIILTVLN LYAIDKYASK FQIFVTIAKL 180
181 LSLAIIIVTG FWYLIVKGET EHFKDAFTPL PNEKYDIGQI SLAFYGALWS FAGWDILNYG 240
241 TPEIKNPRRT MPIALLGGIS AVTLVYMAMN VSYMTVLDTE TLKNSSAVAA DFARITLGDF 300
301 SYAIPFMISI LLIGTLNSNI FCGSRFTHAA AREGHLPTFL SCINAESNSP RAALLFQLIC 360
361 TIAVTFVDTE SLITYVTFVM FGQRVFTMAA LLWIRYRN
|
| Detection Method: |  |
| Confidence: | 1.37 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [399-541] |
1 11 21 31 41 51
| | | | | |
1 IPVHPDAIRV PLIFSILFFM ITIALVVTPF IEDFTTTIVG VGLVLMGFLL YMIFMKPKQL 60
61 PGFLYRFNDG ITRVTCKILF TTPDLKHASE IETLKSDGEL NRGETLSSRF HNESVVSNDE 120
121 RTTLSTSQID TAAAGTAEPM TRL
|
| Detection Method: | |
| Confidence: | 1.07 |
| Match: | 4hb1A |
| Description: | A DESIGNED FOUR HELIX BUNDLE PROTEIN. |
Matching Structure (courtesy of the PDB): |
|
