| Protein: | CE22401 |
| Organism: | Caenorhabditis elegans |
| Length: | 721 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22401.
| Description | E-value | Query Range |
Subject Range |
|
|
498.0 | [0..1] | [721..1] |
|
Region A: Residues: [1-479] |
1 11 21 31 41 51
| | | | | |
1 MSSLLQKMLR TRRVDEQFLR HSEWARRLGV PLMVALAGIK SISMMLFIIL PFSLTQVAGP 60
61 STVLAPIFAF LIIFFSAAHL SELSCTMPKN CVQYHFAYAV IGELPAFVIA WISLVDYVAQ 120
121 AGLFCKAWAD HFNLLFRGLP AKSLTFDVFS TDSMLLSPQV DLLTVLSAII TLCLLLCSLR 180
181 VVGTICVSLL AVTLLIAASC TMVAFFHSDP ENWIKAEFFH FGYQGVLYAI CALCACYTGI 240
241 ESTSCLLEET KNPRKRISGV LSFLVLVLTT IFFVLSITFS LSTNVTALSE GIMIPEVFSV 300
301 INIPAAKYML SVCSVCALSG GVLASFLPAT RVIAALCHDR LIPYAKDTST KSPYFAVLLC 360
361 TVLVALCSMI QKTMLLNFVI FMAPVKLVIT ILLVYLQHYY PEQIGIPEET SNYKSIGKKR 420
421 TRVHIDDGVS IDDSVSLIPS RHLEDHDDQS EVSHSTFDTT AFLYMKATKM ESERLQKRL
|
| Detection Method: |  |
| Confidence: | 9.0 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [480-721] |
1 11 21 31 41 51
| | | | | |
1 EKEQLENEEL QPVLAKSVSQ YHTMDPNLKK AKKIKKHAHN CVAEQCGAEN DDDFNSQEVH 60
61 LFANEEPELP FFSTFSSSAP RPPSPDVSFA TFHRSRRLLF LFCVVTCAFS AFLRNYAVPT 120
121 VTCWMLSIGF VLVIVVFTVN INRLQTNDYL YKKESKVTLF PTTSLFTLFM LLGSFAGSVP 180
181 TKTLAHLVVI PLIGILAYFL YGYRHSKHRK TACLVIENRY LEGADEQYCP IIGLDTSSSS 240
241 DA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
