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View Structure Prediction Details

Protein: sta-1
Organism: Caenorhabditis elegans
Length: 703 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sta-1.

Description E-value Query
Range
Subject
Range
sta-1 - status:Confirmed UniProt:Q9NAD6 protein_id:CAB61149.2
450.0 [0..1] [703..1]

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Predicted Domain #1
Region A:
Residues: [1-625]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGSSSQELQ TALTDVSKTC HHLWEENKDL QGRFVNELGE LQRLQMVIAQ LEQQQRLENV  60
   61 FTVKQQMTEL QKRAATLYEH LTQKRNDIVI KLNDGTNFAT MLQTQLIGEK LFSWKNAQKL 120
  121 AQIGMPFDNR EQLLDEIQIE FEFLADQNWQ LNMFSCWMLD LLRRAPQLND GLAQATIGKL 180
  181 TAITEQLNKL LFMLVSQSFI VSVQPEPVLK TQHKFVTEVR LLIGDKLGIR QHLVNTNVSV 240
  241 KIIAEDEAKQ LSVDYDAHKE IRNNKTVGTI SNDFEKLTMN ERGHLAAKFN NSKLTRIAHR 300
  301 KPPPKGASDL KCAASMQAAT DQKYALLFFI TPFQMGNLSK EEQFDVWTLS LPIMVTVHGS 360
  361 QDCDAQVAIL WHRAFASISR NPNTTDVTAV TWDNLAIMLR NKFSLFTGAR RPLSDSDLAY 420
  421 LSEKMLMPNV ADQKPITFHR FAKQAMRDDL PFSFWEWFFS IMQLIKQKLL KFWDEGWCIG 480
  481 FISKNDASQS MMMCQHSSFL LRFSDSQTGA VSIGFVCEEA DGQKIPFHLA PFTIKDLDQL 540
  541 SLASRIASCP QLKDIRYMYP AIDKEEMLRF FESEERHRVG GGDSPTGYIQ SEIVMVAKTN 600
  601 GRMSNAPSMF GADSPSPLSV QSKLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.69897
Match: 1y1uA
Description: Structure of unphosphorylated STAT5a
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [626-703]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WSPGEVHQNH MMEMSDELGQ ILTVSDMSGD VETLLGPAFK NNITNYNPHD GNHQHNLHFV  60
   61 DMSQQGMMQQ HHNQFYPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle