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View Structure Prediction Details

Protein: CE22105
Organism: Caenorhabditis elegans
Length: 278 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22105.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
177.0 [0..1] [256..1856]

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Predicted Domain #1
Region A:
Residues: [1-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIILLILIA ACVSSDATND SKNAVLGAST STQLASIMNS LHNLQGGGPN AQQTYTGAQY  60
   61 NRLVEKFKKE VDKADELEAE KRQLEAEMVS LKRNFDSQSA ELVKSQNQVL KLDLNVMRLE 120
  121 AKLTSSDANL DRAKDEVETA NRRQKRAEDD AKDARDELEK EKNANRANKA LVDELRNAAA 180
  181 QTTNEMRSLR NRLDECNNQR NGQTTTTTQD GYPFVSNQQN QPRASNTNQG LDRVDVIFVP 240
  241 NTNGDQGSIQ FGNGSPNNGR GGGQYVTPQH LLNLLQRH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle