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View Structure Prediction Details

Protein: scpl-3
Organism: Caenorhabditis elegans
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for scpl-3.

Description E-value Query
Range
Subject
Range
scpl-3 - status:Partially_confirmed UniProt:Q9N4V4 protein_id:AAO21411.1
292.0 [0..1] [287..1]

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Predicted Domain #1
Region A:
Residues: [1-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNVTPKLVW PEDDYVDESL LEDHQGPARL EYDALVMLAN LPPLTEEIMS RCPALPVKTR  60
   61 STPEYTLVLD LDETLVHCSL TPLDNATMVF PVVFQNITYQ VYVRLRPHLR TFLSRMAKTF 120
  121 EIIIFTASKK VYANKLCDIL DPRKNHIRHR LFREHCVCVF GNYVKDLTIL GRDPSKTMIL 180
  181 DNAVQSFAYQ LDNGIPIESW FHDRNDTELL KLCSFLEAIP TLGRDVREIL RHKYRLRDHI 240
  241 PFYSIIHQQE GPGRLPLLEV APPPVTEPND EQLITQVVQK HPQLVQG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.39794
Match: 2hhlA
Description: No description for 2hhlA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle