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View Structure Prediction Details

Protein: CE22016
Organism: Caenorhabditis elegans
Length: 247 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22016.

Description E-value Query
Range
Subject
Range
tag-293 - status:Partially_confirmed UniProt:O01452 protein_id:AAB52313.1
231.0 [0..3] [247..139]

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Predicted Domain #1
Region A:
Residues: [1-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTFVVVSV LALASGTEAA ISGNYNCTTY NGTSFVYTPA AVACSNVISD ASCQVLYAAP  60
   61 DTLYPAAGND AERAYACYTT ATATPAATVS DMVTAAISTC PKTCGFCCAT SAYSCSNVAY 120
  121 PRLTCSSITA AQCASSVWRT IIAEDCPAAC GFCNDGGCVD SVVACANDIS ICTTVGLQDF 180
  181 VNTYCQKTCS RCASSTTTAS SSSSSCTSYT ADSSSACASW AANGFCTNTF YTAATRKSYC 240
  241 ATTCKLC

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 1oahA
Description: Cytochrome c nitrite reductase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle