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View Structure Prediction Details

Protein: hsp-16.41
Organism: Caenorhabditis elegans
Length: 143 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hsp-16.41.

Description E-value Query
Range
Subject
Range
hsp-16.48 - heat shock protein HSP16-48 status:Predicted UniProt:P02513 protein_id:AAB04840.1
132.0 [0..1] [143..1]

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Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMLRSPYSD SNALDHFLDE LTGSVQFPYW RNADHNSFNF SDNIGEIVND ESKFSVQLDV  60
   61 SHFKPENLKI KLDGRELKIE GIQETKSEHG YLKRSFSKMI LLPEDADLPS VKSAISNEGK 120
  121 LQIEAPKKTN SSRSIPINFV AKH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.39794
Match: 1gmeA
Description: Small heat shock protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.3360635562029 bayes_pls_golite062009
protein binding 0.743263427072441 bayes_pls_golite062009
unfolded protein binding 0.540503020005284 bayes_pls_golite062009
catalytic activity 0.260308151913118 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle