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View Structure Prediction Details

Protein: pisy-1
Organism: Caenorhabditis elegans
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pisy-1.

Description E-value Query
Range
Subject
Range
gi|47210001 - gi|47210001|emb|CAF90496.1| unnamed protein product [Tetraodon nigroviridis]
145.0 [0..7] [164..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPTAAENNN NVWLFYPNLI GYGRIVLAIL AMYYMSSAPW CAMFCYALSA GLDAFDGWAA  60
   61 RTYNQSSRFG AMLDQLTDRC ALLALVMALC KFYPDHLFLL QLSAVIDIAS HWLHLHATDL 120
  121 SGATSHKQSS NWLLNLYYTD RLFLGFMCGG NEAFYILLYI RAFWAGPLIF NFHFMSIFPL 180
  181 IAFPIAFVKS AISVVHLYTA AEMVVAHDVK LRVEAAQKAQ 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.522879
Match: PF01066.12
Description: No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle