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View Structure Prediction Details

Protein: CE21934
Organism: Caenorhabditis elegans
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21934.

Description E-value Query
Range
Subject
Range
ZFPL1_CAEBR - Zinc finger protein-like 1 homolog OS=Caenorhabditis briggsae GN=CBG06644 PE=3 SV=1
273.0 [0..1] [309..1]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCKCPKRK VTNLFCYEHR VNVCEFCLVD NHPNCVVQSY LTWLTDQDYD PNCSLCKTTL  60
   61 AEGDTIRLNC LHLLHWKCFD EWAANFPATT APAGYRCPCC SQEVFPPINE VSPLIEKLRE 120
  121 QLKQSNWARA AL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 1fbvA
Description: Cbl; N-terminal domain of cbl (N-cbl); CBL
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [133-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLPTLPELNR PVPSPAPPQL KNAPVMHKEV PVHNNRSSTP ATHLEMEDTA SYSVSNNDVT  60
   61 FARKKNYGAE SSSDTRPLLQ LRDADNEENK YKRRPTMDWM RGLWRAKHGG SGVPQERASA 120
  121 KKIALFVIFL AVLALITIIM VMKRAGYSGE HSSDPLFDPM ANPNIRVAVE DSRLPHV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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