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View Structure Prediction Details

Protein: CE21884
Organism: Caenorhabditis elegans
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21884.

Description E-value Query
Range
Subject
Range
gi|110827356, gi... - gi|111615223|ref|ZP_01402289.1| Sugar phosphate permease-like [Verminephrobacter eiseniae EF01-2], g...
191.0 [0..21] [430..297]

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Predicted Domain #1
Region A:
Residues: [1-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVYTTIFLY ALTSSVFFPV FQSLIFYKAC ITLSNSTEPE IACKSKETYA RDNSVHSMSS  60
   61 VILMASSTGL CVSAFFTSRW VGHLSDVKSR KLAFLIPFIG LFISDFTILI QVLYPRLSPY 120
  121 YFIVSEVIYG FFGGYMSITS GAFSIVSTMH SDQRERAKGI ARLEGTISLG STVGFLISSQ 180
  181 LKNFGYLGAA SFFLVAHFIA FMSAVFMRDP EKPDLQEKCV KRKPFCHGTD LLKDKKPPTS 240
  241 TNLKILYFSF ACSYFAFIGS TRILFFYLKH RFFWGAEEFG YLKAMNTGMT TIMSLALYPF 300
  301 LKNLGITDIR LAIFGLLTRS IGRAWYAVAW EGWTVFIVVF FEMFSKFPAT AMRSSIATNV 360
  361 GEHERGLAFS LVAVIEALCN LTSSWVFHLA WPLSLNVFPQ LSFVIMPIII LPAITLMILN 420
  421 MRYLEAPELN PEDLTTSIKK SDDISENVNV HDPEALPVLH HIPTETDTLT DSTSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle