YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE21726
Organism: Caenorhabditis elegans
Length: 317 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21726.

Description E-value Query
Range
Subject
Range
gi|2217927 - gi|2217927|dbj|BAA20559.1| alpha(1,2)fucosyltransferase [Homo sapiens]
216.0 [0..20] [307..100]

Back

Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLVTCFLLC DRTKVPPEFY NNTTMQNRLI FQTFISHNAN HTIIAIKFKK LQVYSFSKFP  60
   61 LLNGGSSSPE KKARELLIRV SVGDNKFVGI KRDLRIKIKN PAQFHNCSKT HLMLDGHYFQ 120
  121 SFKYFDHLRP QILQWLAPTN TTTLKAISLL PVLVRREF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KICVHIRRGD FQFDGVHEPT DATFTRNAVD YLIRKYQSFH PKVSVIVLGN DEKFAYTIFE  60
   61 GSNFLLTTSD CFCDTKVVKI GKLNPEKGFS AFQFVPGTND TVIVALKTSE IPKNPPGGTY 120
  121 LATWITVFRT DGTVILEDQE LEKNVKYEGI ELANVFNCL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.0
Match: 2h2nA
Description: No description for 2h2nA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle