| Protein: | CE21682 |
| Organism: | Caenorhabditis elegans |
| Length: | 735 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21682.
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..3] | [734..277] |
|
Region A: Residues: [1-413] |
1 11 21 31 41 51
| | | | | |
1 MTVHHHHHTH HVSLHKIKKL FSKHSSHGHK LTRDEARSAL HDIEHLAKEL HFQKVFDHHA 60
61 HDGHISLKGF LSFISPHHGH HTHHAHGAHP GHHEVHHHHH HVKAQDSSSS SSSSSSSSSS 120
121 SSSSSSSSSS SSSESEDEKH HHKKHAKKHL KKHHKKAESS SSSSSSSSSS SSSSSSSSSS 180
181 ESEDEKHHHK KHAKKHLKKH HKKAESSSSS SSSSSSSSSS SSSSSSSSES EDEKHHHKKH 240
241 AVKKHHKKAE SSSSSSSSSS SSSSSSSSED EKHHHKKHAA KKHVKHHKKA ASSSSSSSSS 300
301 SSSSSSSSSS SSSESEDEKK KKKVHHKKSH GKKHHKKAAS SSSSSSSSSS SSSSSSSSES 360
361 EDEKKHAPAH HEHHEHKDGA HHEHKEGEHH EHAAHHDEHG VHHRHHGEHH GTH
|
| Detection Method: |  |
| Confidence: | 3.77 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [414-551] |
1 11 21 31 41 51
| | | | | |
1 HSPAHHGEHG THHGHHGEHH HAPAHHGHHE SHGHGHHSPA HHGHHGEHHH APAHHGHHGE 60
61 HHHAPAHHGH HGEHGTHHGH HGSHHSPAHH GHHGEHHHAP AHHGHHGEHG THHGHHGEHH 120
121 HAPAHHGHHG EHGTHHGH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [552-735] |
1 11 21 31 41 51
| | | | | |
1 HGSHHSPAHH GHHGEHHHAP AHHGHHGHHG SHGVHHGHHE SHGHGHHAPA HHGHHGEHGV 60
61 HHGHHGAGYG AHHGHHGAHH HHAPHHEHHE HHGDHHHGSH GVHHGHHGTH HSLAHHGHHG 120
121 GHGTHHGAHH SPAHHGHHGA HHEHGAHHGA HHGHHDDKEN HHHHGHHSKH SKKQHTKKSH 180
181 KKSH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
