| Protein: | pvf-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 304 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pvf-1.
| Description | E-value | Query Range |
Subject Range |
|
|
221.0 | [0..31] | [274..46] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MQNPMILLIF CLFCAVICSR GTDSDIPHEF HKMLKHAKSL NSLLRDLHVI YSPEMTNRHV 60
61 EKTDKHGAAL SLKSGSMSAQ RIVSIQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [87-200] |
1 11 21 31 41 51
| | | | | |
1 NISDDEMDGY TLFHLQSMKD IKQGNDTCNL QSVCVPIPQL SDDPQVLMYP KCYEVKQCVG 60
61 SCCNSVETCH PGTINLVKKH VAELLYIGNG RFMFNMTKEI TMEEHTSCSC FDCG
|
| Detection Method: | |
| Confidence: | 22.69897 |
| Match: | 1fzvA |
| Description: | Placenta growth factor-1, PLGF-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.587687438033265 | bayes_pls_golite062009 |
| protein binding | 0.53742562922963 | bayes_pls_golite062009 |
|
Region A: Residues: [201-304] |
1 11 21 31 41 51
| | | | | |
1 SNTPQCAPGF VVGRSCTCEC ANKEERNNCV GNATWNAETC KCECDLKCEE GKILHKDRCD 60
61 CVRRRQHHGG PRGHHGHRHH HRSRPIDTEE VQKIGQLKVG RIGG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
