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View Structure Prediction Details

Protein: trap-3
Organism: Caenorhabditis elegans
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for trap-3.

Description E-value Query
Range
Subject
Range
gi|58386588, gi|... - gi|58386588|ref|XP_314880.2| AGAP008761-PA [Anopheles gambiae str. PEST], gi|55239960|gb|EAA10212.2|...
265.0 [0..4] [178..13]

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Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLTKEEEL LLSSYSATSS TKGNLFFYLN ALIISIAPLY LFYGVHQMEI QDSLVVWGLS  60
   61 AVGTAYLLSL ACKNQKCLLK HQIVMKRGSA VEREISGQYA ADKKMTVKEK EERALFRKNE 120
  121 VADTESTYLS VFYTNSLYLT IMLVSAFFLL ANVAPVFNLL ISTIGSAGLV AFLSTAKN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 129.060481
Match: PF07074.3
Description: No description for PF07074.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle