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View Structure Prediction Details

Protein: CE21438
Organism: Caenorhabditis elegans
Length: 270 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21438.

Description E-value Query
Range
Subject
Range
gi|7549210 - gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antigen p200 [Babesia bigemina]
145.0 [0..2] [270..230]

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Predicted Domain #1
Region A:
Residues: [1-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERVRRDERK AAEDEQRVLD RQIQAENERR LMQLRARADQ RMETMFSGGA GSSSAGAAKD  60
   61 VSISDETGHV NLFQDLEREE RKNYGSGNRD YEAEKAAEKK EWESKMGIQV YFADNTNDLN 120
  121 KKKEWYEELP LRRAAEPLDR RKARDALPCL KRKELEEERK RKREDSDSEE KAKKRHKKDK 180
  181 KKKKKKHRHR DSSEERQLEE EYDRERRQKL ASMRDERLKR ERVEKARAHA LLHPEEIELL 240
  241 QKRKAAEDSE EKRGKKKKYN SQFNPEFFRQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle