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View Structure Prediction Details

Protein: glb-28
Organism: Caenorhabditis elegans
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glb-28.

Description E-value Query
Range
Subject
Range
gi|39596678, gi|... - gi|39596678|emb|CAE63297.1| Hypothetical protein CBG07681 [Caenorhabditis briggsae], gi|187033233|em...
gi|157771840 - gi|157771840|ref|XP_001677740.1| Hypothetical protein CBG07681 [Caenorhabditis briggsae AF16]
166.0 [0..1] [208..1]

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Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRHEIQPPE FSFSPISLDE DQRCMSLSRL SSNHLGAPKP LRRCRSASPA TCRDLTISPE  60
   61 HQKLIKRSWN RIPKAQFGRA SLEAFITAAQ VTHAIFVDKE TENRHVKYFV DLVQSCVDNL 120
  121 ENLETGVKPW LDLIGRGHAN FKITGKHWEK FGESLLTTAT EWNGPGRRHK ETVKAWMVMS 180
  181 SFLADRLAHA SRLAHHSPML TPRVQLLTGR SAFEFNN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.69897
Match: 1dxtB
Description: Hemoglobin, beta-chain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle