YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE21326
Organism: Caenorhabditis elegans
Length: 538 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21326.

Description E-value Query
Range
Subject
Range
gi|83636490, gi|... - gi|83648447|ref|YP_436882.1| FAD/FMN-containing dehydrogenase [Hahella chejuensis KCTC 2396], gi|836...
342.0 [0..3] [515..11]

Back

Predicted Domain #1
Region A:
Residues: [1-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLGTVKAKA IRWLEDNRGL VIVLFCLPAS FLFDLFIQFR IWLDRKLSAT TSHQQRVQKI  60
   61 QDQVTEWSKL PDSEQKPLCT ARPNWLSLST TFFDKRKCHQ VPIDLHDVLS LDEKNLTVTV 120
  121 EPNITVREIC KFLIPKGYTL AVTLEIGDAT LGGLAFGVGM TTYSHKVGLY QEAIVSYEVV 180
  181 TADGNVITVT DSNEHSDLFY CLPWSHGTLG FLVGLTLRIV KVKPYVHMEY IPCHSQDEYC 240
  241 KKIMELSGAT DKNTKVADYL EVTIYDKNEA VIMVGNFADV DSKSNAKVND VCWFYKPWFY 300
  301 KHVETFLKKG GEEYIPLESY LLRHNRAIFW VVESMIPFGN HPVFRAFLGW LCPPKPAFLK 360
  361 FTTTQAVREM TFAKQVFQDI VMPLDTLKEQ VDTAVKLFDT YPLLVYPCRI YDHKGGAPQG 420
  421 QLRAPPKSRL VPGTNYSMFN DLGVYGTPGQ VERREPYNPT HAMRAMEKFT RDVGGYSFLY 480
  481 ADIFMSEEEF NEMFDMTLYN QVRLRYHCDG AFPRLYDKVK PEIDVISIGE TYAVKKEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.0
Match: 2uuuA
Description: No description for 2uuuA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle