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View Structure Prediction Details

Protein: CE21261
Organism: Caenorhabditis elegans
Length: 520 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21261.

Description E-value Query
Range
Subject
Range
CE20573 - phosphate permease status:Confirmed UniProt:Q18697 protein_id:AAB03157.2
346.0 [0..39] [518..6]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISTHLAPPF QYYAPNPVAP PIPTLDEKYK PFPHYNLEVV QWSLIFGVCL ILGVGMGAND  60
   61 IADSFGTSVG TGILTVTQAF ILATVVEMMG SVASGFSGDG QQLQVVNTES YEDNPDELVI 120
  121 GQIAMLVGCA TWLMVATFYS MPVSAIHSLL GATIGFSLVL RGLDGIVWDR VGMVMAVWIL 180
  181 SPIVSAIFTL IT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [193-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FFLVDVAILR AKNPVKRGIF LLPGIYAIVV FSNVFLFLQD GSKVFRIDEI PFLYTVAASL  60
   61 IIAVLAGFLA LFVVGPIMQR KLKSKFTDEQ KFVTATLHGW LIRKKRTKKI SVFILKYSEK 120
  121 TEKLPRIASS LSYTFPIVPR GWLRRAVYWA FPP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [346-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNDDQKAVR LFSFLQILTA CFAGFAHGAN DISNCVGPVR DLVHMYNEGY REDNTKLNIT  60
   61 VYILLLTTLA VVMGIWTLGV RVIRTVGKFS KMNPATGFSV QFGAAITALV NNMYNIPESG 120
  121 THCLVGSIFG LGLVRSGPIL EWHTVKYVFV SWILTIPGSG LISAAVMYLL QAVLG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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