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View Structure Prediction Details

Protein: CE21240
Organism: Caenorhabditis elegans
Length: 578 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21240.

Description E-value Query
Range
Subject
Range
gi|68363078 - gi|68363078|ref|XP_692491.1| PREDICTED: similar to dihydroxyacetone kinase (5D126) [Danio rerio]
659.0 [0..3] [576..1002]

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Predicted Domain #1
Region A:
Residues: [1-578]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKFVNKAE EAVDDALFGL VSSNSNVKFH KSCRRVVHIT DLNPSHHVSL IAGGGSGHEP  60
   61 YAAGYVGKGL LTAAIAGNVF ASPPSRNVQA ALEATRGEAG AILFVINYTG DRLNFGLAAE 120
  121 RFNASGGTAR VVTIADDVAI DSPNSKVGRR GLAGAVLTIK IAGAMAWEGK SLDEIYETSQ 180
  181 KVVSSMGTLG VSLYTGSLPG KNRETELPDD QIEVGLGIHG EPGKFRAQFG SANRIVHSLL 240
  241 DTLRSKMEMR EGEKFVVLVN NLGSVSQLEM NIVNGEVLRY FEDHKIGITR FFSGIYMTSL 300
  301 DGHGVSVTIL RADDSMLQYL DAPAAAPGWI PALSVQKCVD HQEISDSSSQ GDLISEIPAS 360
  361 GVTVNAQLVE ACVGGVVDAM LESEKHLNQL DAYAGDGDCG STFAGAAEAI RKQTSGLNYT 420
  421 HPETLLKQLS IIFEQTVGGT SGALYALMFS SAAQSFAQRS QRGEKIDRTS ILEALDKANR 480
  481 AVQKYGGARV GDRTMVDGLD AMVEELRKGF SGNEESLDAI FEAAVKASEK AAKATASQTA 540
  541 TVGRASYTSS EAQTKPDAGA TAISLWLRAC WTAYKSEK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 135.0
Match: 1un8A
Description: Crystal structure of the dihydroxyacetone kinase of C. freundii (native form)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
glycerone kinase activity 3.66907507772019 bayes_pls_golite062009
binding 0.69038000262198 bayes_pls_golite062009
catalytic activity 0.142389024724964 bayes_pls_golite062009
protein binding 0.133716715271428 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle