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View Structure Prediction Details

Protein: CE21178
Organism: Caenorhabditis elegans
Length: 356 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21178.

Description E-value Query
Range
Subject
Range
gi|39593577, gi|... - gi|39593577|emb|CAE61869.1| Hypothetical protein CBG05849 [Caenorhabditis briggsae], gi|187034668|em...
gi|157756241 - gi|157756241|ref|XP_001670464.1| Hypothetical protein CBG05849 [Caenorhabditis briggsae AF16]
276.0 [0..1] [356..1]

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Predicted Domain #1
Region A:
Residues: [1-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFSLEESA VKILGVTIAV IGAIYLIYPP GLLLIPLSLF IFSYTTKNEK CSSKNVDTFF  60
   61 SGFKIGGHRG APKSFPENSM AGFAQAKADG ADLIEFDVAL TKDGKAVLMH DDDLDRTTDM 120
  121 KGPIRDKTRA ELDRCDISAT FKRTAPGDHC RLATVSRERV PDMEDVVKWA VENNTRMLFD 180
  181 VKDSDNELVD QIANLFQKYN LYDKAIVCSF FPWVVYRIKK GDQKILTGLT WRLKFWSYHD 240
  241 IENIRPRYSG PKQMLFEMID VAHVWLLKKV TPWYLGADLL LTNNLDISQA LIMDQRRRGM 300
  301 RVAVWTVNDM AEMHWMLKTL NIPILTDYPE LTTQAAHLEE LQKRDYMPMH KSSSDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.69897
Match: 2oogA
Description: No description for 2oogA was found.

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