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View Structure Prediction Details

Protein: CE21177
Organism: Caenorhabditis elegans
Length: 478 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21177.

Description E-value Query
Range
Subject
Range
gi|49527412 - gi|49527412|emb|CAG61052.1| unnamed protein product [Candida glabrata]
gi|50291337, gi|... - gi|50291337|ref|XP_448101.1| unnamed protein product [Candida glabrata], gi|49527412|emb|CAG61052.1|...
295.0 [0..34] [473..108]

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Predicted Domain #1
Region A:
Residues: [1-478]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYGINRFHI CAFITWQFAN FFAGQNIFGI YSNNVSKWKC GDSKPTKDCN IYLSCPKSNL  60
   61 TFVDPPFQSA AIEFDWICGS SVFYQSFFSQ VQYVGVLIGT LLFGSLSDRF GRRPIGILVI 120
  121 SNAICSTFAS GLAPSVKILF PLRFLVGLSI GGMLVVICAW IMEVILPQQR MVVRGFFNWG 180
  181 WTRIFLTSIC YFTREWRLAT YVSSLSLIPA LLLVIFVIPE SPVWLHSRGF KARMIQSEMQ 240
  241 IARIAGVPYV PVQHKLVRPK SLMDTLKTKG MFKKLFILWT MWFIIAICGF ANDLSSGTLA 300
  301 GDLYLNQLFF GILLVFSKML LLFVDTYFTN FKRRTLHQGS QIGTLCCFII LTTFMSMDYH 360
  361 GIGVLIVYLI GTTFIEYTWD ACYLCAIELM ETPSRASATG SCSLIARIGM ILAPFLTYAN 420
  421 TWWSPAVNVT VIVLGSANLL ISYFFLPESK GVNLDDVHVN DDDENVPENT PMVQKVRE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.154902
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle