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View Structure Prediction Details

Protein: sng-1
Organism: Caenorhabditis elegans
Length: 247 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sng-1.

Description E-value Query
Range
Subject
Range
gi|76645654 - gi|76645654|ref|XP_591559.2| PREDICTED: similar to synaptogyrin 2 [Bos taurus]
242.0 [0..1] [237..132]

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Predicted Domain #1
Region A:
Residues: [1-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENVRAYGAG LAGANFDKNT FFKKPTVLFR CAALLFGLIL WYSVSKGGWH KPSDAIHPVC  60
   61 LYGRSSSTCS FATAVGFFAV CGAIVLIVLD AKMDQISSVP TRRRAVLADL VVSAIFTAIF 120
  121 LIGFFTFWSK LSAFEVDEDD ENPIKTNNAK FGILSALLSF LAWGGAAFFA WRRYEEGNQA 180
  181 THEPNYDEHF GQVSTDVQDG YGYGGDSTGI GHVGAPPPQS SYQSGAAPQT MQQPPSNPYT 240
  241 QSEGYGY

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 39.356547
Match: PF01284.14
Description: No description for PF01284.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle